Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya solani |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1077308 bp
Thymine Count
1075370 bp
Guanine Count
1377156 bp
Cytosine Count
1389999 bp
Genome Length
4919833 bp
Protein-coding Genes
4073 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter permease | A4U42_20795 | P0AFL2 | Negative | 4858396 - 4859214 | 29393.0 |
| polyamine abc transporter substrate-binding protein | A4U42_20800 | P31135 | Negative | 4859248 - 4860519 | 47118.2 |
| spermidine/putrescine abc transporter substrate-binding protein | A4U42_20805 | Q9I6R6 | Negative | 4860556 - 4861587 | 37791.8 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | A4U42_20810 | P25526 | Negative | 4861880 - 4863340 | 51679.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | A4U42_20815 | P50457 | Negative | 4863362 - 4864627 | 44742.7 |
| decarboxylase | A4U42_20820 | P49309 | Positive | 4864754 - 4866241 | 55566.4 |
| spermidine/putrescine abc transporter atp-binding protein | A4U42_20825 | A1TAI4 | Positive | 4866644 - 4867738 | 41047.5 |
| tautomerase ppta | A4U42_20830 | A7MK78 | Positive | 4867967 - 4868197 | 8589.24 |
| hypothetical protein | A4U42_20835 | Not Available | Positive | 4868696 - 4869679 | 38022.3 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | A4U42_20840 | Q975N4 | Positive | 4869707 - 4870738 | 38526.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

