Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya solani |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1077308 bp
Thymine Count
1075370 bp
Guanine Count
1377156 bp
Cytosine Count
1389999 bp
Genome Length
4919833 bp
Protein-coding Genes
4073 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A4U42_20295 | P46381 | Positive | 4740635 - 4741492 | 32925.7 |
| hypothetical protein | A4U42_20300 | Q56956 | Negative | 4741539 - 4742087 | 20630.8 |
| pectin degradation protein | A4U42_20305 | Q05527 | Negative | 4742342 - 4742674 | 12381.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | A4U42_20310 | Q05529 | Positive | 4742998 - 4743834 | 31305.2 |
| 2-deoxy-d-gluconate 3-dehydrogenase | A4U42_20315 | Q05528 | Positive | 4744021 - 4744782 | 27242.8 |
| pectate lyase | A4U42_20320 | Q05526 | Positive | 4745044 - 4746675 | 62873.4 |
| sugar abc transporter permease | A4U42_20325 | O31519 | Positive | 4746720 - 4747610 | 33357.1 |
| sugar abc transporter permease | A4U42_20330 | O31520 | Positive | 4747603 - 4748505 | 33986.1 |
| sugar abc transporter atp-binding protein | A4U42_20335 | P94360 | Positive | 4748519 - 4749646 | 41934.0 |
| sugar abc transporter substrate-binding protein | A4U42_20340 | O31518 | Positive | 4749661 - 4750953 | 48533.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

