Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya solani |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1077308 bp
Thymine Count
1075370 bp
Guanine Count
1377156 bp
Cytosine Count
1389999 bp
Genome Length
4919833 bp
Protein-coding Genes
4073 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metallopeptidase rsep | A4U42_13995 | Q8ZH59 | Positive | 3238125 - 3239480 | 49200.6 |
| outer membrane protein assembly factor bama | A4U42_14000 | C6DAJ1 | Positive | 3239515 - 3241953 | 89775.2 |
| molecular chaperone | A4U42_14005 | Q6D8D4 | Positive | 3242093 - 3242590 | 18435.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | A4U42_14010 | Q6D8D3 | Positive | 3242594 - 3243616 | 35634.2 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | A4U42_14015 | Q6D8D2 | Positive | 3243765 - 3244220 | 17169.0 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | A4U42_14020 | Q6D8D1 | Positive | 3244224 - 3245012 | 28002.7 |
| lipid-a-disaccharide synthase | A4U42_14025 | Q6D8D0 | Positive | 3245016 - 3246164 | 42466.0 |
| ribonuclease hii | A4U42_14030 | C6DAJ7 | Positive | 3246161 - 3246757 | 21592.2 |
| dna polymerase iii subunit alpha | A4U42_14035 | Q8X8X5 | Positive | 3246833 - 3250315 | 130064.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | A4U42_14040 | C6DAJ9 | Positive | 3250328 - 3251287 | 35377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

