Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya solani |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1077308 bp
Thymine Count
1075370 bp
Guanine Count
1377156 bp
Cytosine Count
1389999 bp
Genome Length
4919833 bp
Protein-coding Genes
4073 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenoid biosynthesis protein elbb | A4U42_10795 | P0ABU5 | Positive | 2530290 - 2530943 | 22983.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | A4U42_10800 | C6DIR2 | Positive | 2530940 - 2531689 | 27919.1 |
| alginate lyase | A4U42_10805 | Not Available | Positive | 2531783 - 2533087 | 48285.5 |
| bon domain-containing protein | A4U42_10810 | Q7CPQ6 | Negative | 2533180 - 2533755 | 20008.1 |
| phosphoheptose isomerase | A4U42_10815 | C6DIR5 | Negative | 2533766 - 2534356 | 21095.4 |
| hypothetical protein | A4U42_10820 | C6DIR6 | Negative | 2534394 - 2534789 | 14351.2 |
| penicillin-binding protein | A4U42_10825 | C6CMD7 | Negative | 2534747 - 2536837 | 73535.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | A4U42_10830 | P67088 | Positive | 2536897 - 2537766 | 32029.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2537809 - 2538189 | Not Available |
| shikimate 5-dehydrogenase | A4U42_10840 | P44774 | Positive | 2538456 - 2539265 | 29681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

