Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya solani |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1077308 bp
Thymine Count
1075370 bp
Guanine Count
1377156 bp
Cytosine Count
1389999 bp
Genome Length
4919833 bp
Protein-coding Genes
4073 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | A4U42_08995 | P0AEQ8 | Positive | 2133187 - 2133948 | 27540.6 |
| 6-phosphogluconate phosphatase | A4U42_09000 | P31467 | Negative | 2133953 - 2134621 | 24698.9 |
| adenine permease purp | A4U42_09005 | P31466 | Positive | 2134894 - 2136231 | 46386.1 |
| hypothetical protein | A4U42_09010 | P0ADM9 | Negative | 2136295 - 2137035 | 27863.5 |
| effector protein | A4U42_09015 | P0AAK6 | Negative | 2137353 - 2137886 | 19009.9 |
| oxidoreductase fes-binding subunit | A4U42_09020 | P37127 | Negative | 2137883 - 2139886 | 72740.7 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | A4U42_09025 | Q2NRV5 | Positive | 2141277 - 2142419 | 41551.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | A4U42_09030 | Q2NRV6 | Positive | 2142419 - 2143402 | 36666.1 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | A4U42_09035 | A6TF98 | Positive | 2143399 - 2145390 | 74217.5 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | A4U42_09040 | A4WAM2 | Positive | 2145387 - 2146286 | 33279.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

