Dickeya solani

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya solani is a rod-shaped bacterium notable for its pathogenicity, particularly affecting crops such as Solanum tuberosum (potato) and Daucus carota (carrot). This organism possesses flagella, which contribute to its motility and potentially facilitate its spread within plant tissues. Characterized by having two replicons, Dickeya solani exhibits a complex genomic structure that may play a role in its adaptability and virulence. It is known for causing soft rot, a significant health concern in agriculture, leading to substantial losses in crop yield and quality. The bacterium has been documented in genetic databases with specific accessions, such as CP015137.1 and CM001859.1, which provide valuable resources for further research and understanding of its genetic makeup and pathogenic mechanisms. From an ecological perspective, Dickeya solani's ability to infect prominent agricultural hosts like potatoes and carrots highlights its role in impacting food supply chains and agricultural practices. The presence of this pathogen underscores the importance of monitoring and managing bacterial diseases to ensure crop health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya solani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum, Daucus carota
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya solani , Complete Genome

Gene Summary

Adenine Count

1077308 bp

Thymine Count

1075370 bp

Guanine Count

1377156 bp

Cytosine Count

1389999 bp

Genome Length

4919833 bp

Protein-coding Genes

4073 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ef-p beta-lysylation protein epmbA4U42_06545P39280Positive1596886 - 159792939270.3
hypothetical proteinA4U42_06550P0AF71Negative1597981 - 159832511733.0
beta-mannosidaseA4U42_06555O05512Positive1598592 - 159972841942.3
glucose-6-phosphate isomeraseA4U42_06560C6DFP4Negative1599819 - 160146861161.4
lysine-sensitive aspartokinase 3A4U42_06565P08660Positive1602021 - 160338548919.7
chemotaxis proteinA4U42_06570Q2W4T8Positive1603635 - 160467538189.9
hypothetical proteinA4U42_06575P0AF43Negative1604723 - 160636959785.6
anion permeaseA4U42_06580O34726Positive1606681 - 160813552142.9
methionine synthaseA4U42_06585P13009Negative1608203 - 1611886135259.0
transcriptional repressor iclrA4U42_06590P16528Positive1612051 - 161287829639.9

Displaying genes 1331 – 1340 of 8420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Soft rotCausesPMC11149725

Displaying health effects 1 – 1 of 1 in total