Rhodospirillum rubrum S 1, S1

SpirillaMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodospirillaceae

Genus

Rhodospirillum

Description

Rhodospirillum rubrum S1 is a Gram-negative, photolithotrophic bacteria that functions as a photoautotroph, utilizing light as its primary energy source. It is characterized by its spiral shape (spirilla) and exhibits mobility due to the presence of flagella. R. rubrum S1 is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. The optimal growth temperature for this species is 25°C, placing it within the mesophilic temperature range. Genetically, R. rubrum S1 has three replicons, which may contribute to its adaptability and genetic diversity. This organism is noted to be free-living, suggesting it does not rely on a host for survival. The accessions associated with R. rubrum S1 include CP077803.1, CP077804.1, and CP003046.1, which provide extensive genomic information that can be useful for further studies. In an ecological context, the ability of R. rubrum S1 to utilize light for energy while also being capable of surviving in various oxygen conditions highlights its potential role in diverse environments. This adaptability may allow it to participate in biogeochemical cycles, particularly in environments where light is available, and contribute to the cycling of nutrients in ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodospirillaceae
GenusRhodospirillum
SpeciesRhodospirillum rubrum
StrainS 1, S1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodospirillum rubrum S 1, S1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhotolithotroph - Photoautotroph
PathogenicityNot Available

Genome Summary

Rhodospirillum rubrum S 1, S1, Complete Genome

Gene Summary

Adenine Count

752158 bp

Thymine Count

751730 bp

Guanine Count

1424907 bp

Cytosine Count

1423775 bp

Genome Length

4352570 bp

Protein-coding Genes

3850 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine utilization repressorF11_06695P22773Positive1528275 - 152900927216.8
extracellular solute-binding proteinF11_06700P0AEN0Positive1529243 - 153008830182.2
amino acid abc transporter permeaseF11_06705P54536Positive1530160 - 153081622976.2
amino acid abc transporter permeaseF11_06710P0AFT3Positive1530816 - 153149624898.4
abc transporter proteinF11_06715O34677Positive1531496 - 153228729286.6
fad linked oxidase-like proteinF11_06720F1QXM5Positive1532308 - 153367847811.7
n-formylglutamate deformylaseF11_06725Q9HU92Negative1533684 - 153447829102.9
histidine ammonia-lyaseF11_06730Q2RUU3Negative1534495 - 153603952976.3
n-formimino-l-glutamate deiminaseF11_06735Q9HU77Negative1536036 - 153740348440.6
imidazolonepropionaseF11_06740Q2RUU1Positive1537507 - 153875142976.8

Displaying genes 5331 – 5340 of 7914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.