Arcobacter pacificus SW028

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Arcobacter pacificus SW028 is a Gram-negative bacterium characterized by its rod shape. This species has been identified with a single replicon, which indicates its genomic structure is relatively simple compared to some other bacteria that may possess multiple replicons. The genomic information of Arcobacter pacificus SW028 is cataloged under the accession number CP035928.1, which serves as a reference for researchers interested in studying its genetic makeup and potential applications. As a member of the Arcobacter genus, A. pacificus may be associated with various ecological niches, particularly in aquatic environments. The traits of being Gram-negative and rod-shaped suggest that this bacterium could be adapted to thrive in diverse conditions, potentially contributing to nutrient cycling in its habitat. While specific ecological roles are not detailed in the provided traits, the presence of Arcobacter species in marine and freshwater contexts often implicates them in interactions with other microorganisms and their environments. Understanding the characteristics of Arcobacter pacificus SW028 can provide insights into its ecological significance and potential applications in biotechnology or environmental microbiology. Further research is needed to elucidate its specific interactions within ecosystems and its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter pacificus
StrainSW028

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arcobacter pacificus SW028, Complete Genome

Gene Summary

Adenine Count

950800 bp

Thymine Count

962148 bp

Guanine Count

373474 bp

Cytosine Count

371569 bp

Genome Length

2657991 bp

Protein-coding Genes

2491 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombination factor protein raraAPAC_0074Q9WYX8Negative76695 - 7788244745.9
23s rrna pseudouridine 2605 synthaseAPAC_0075P55986Negative77866 - 7866930350.6
d-arabinose 5-phosphate isomeraseAPAC_0076Q9ZJI5Negative78670 - 7963234855.5
mrna degradation ribonuclease j1/j2 (metallo-beta-lactamase superfamily)APAC_0077B9XZG7Negative79653 - 8161774089.5
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseAPAC_0078A8EQW4Negative81598 - 8239830488.9
imidazole glycerol phosphate synthase hisfh, hisf subunitAPAC_0079A8EQW5Positive82471 - 8323227285.6
simpl domain-containing proteinAPAC_0080Not AvailablePositive83234 - 8391426227.2
putative nucleoside phosphorylaseAPAC_0081Not AvailablePositive83914 - 8445020072.9
23s rrna m2a2503 methyltransferase / trna m2a37 methyltransferaseAPAC_0082A8EQW8Positive84469 - 8555141063.8
glutamyl-trna synthetaseAPAC_0083A8EQW9Positive85644 - 8705353235.6

Displaying genes 71 – 80 of 2561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.