Arcobacter pacificus SW028

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Arcobacter pacificus SW028 is a Gram-negative bacterium characterized by its rod shape. This species has been identified with a single replicon, which indicates its genomic structure is relatively simple compared to some other bacteria that may possess multiple replicons. The genomic information of Arcobacter pacificus SW028 is cataloged under the accession number CP035928.1, which serves as a reference for researchers interested in studying its genetic makeup and potential applications. As a member of the Arcobacter genus, A. pacificus may be associated with various ecological niches, particularly in aquatic environments. The traits of being Gram-negative and rod-shaped suggest that this bacterium could be adapted to thrive in diverse conditions, potentially contributing to nutrient cycling in its habitat. While specific ecological roles are not detailed in the provided traits, the presence of Arcobacter species in marine and freshwater contexts often implicates them in interactions with other microorganisms and their environments. Understanding the characteristics of Arcobacter pacificus SW028 can provide insights into its ecological significance and potential applications in biotechnology or environmental microbiology. Further research is needed to elucidate its specific interactions within ecosystems and its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter pacificus
StrainSW028

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arcobacter pacificus SW028, Complete Genome

Gene Summary

Adenine Count

950800 bp

Thymine Count

962148 bp

Guanine Count

373474 bp

Cytosine Count

371569 bp

Genome Length

2657991 bp

Protein-coding Genes

2491 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n6-l-threonylcarbamoyladenine synthase, tsad subunitAPAC_0214A8ER74Positive211614 - 21261536915.9
eif1/sui1 family translation initiation factorAPAC_0215A2SQ91Positive212615 - 21295612782.5
carbohydrate kinase, yjef-related proteinAPAC_0216Q9ZJM4Positive212988 - 21437351067.6
putative cuta divalent ion tolerance proteinAPAC_0217O58720Positive214370 - 21469612454.9
1-deoxy-d-xylulose 5-phosphate:thiol sulfurtransferaseAPAC_0218A8ER78Positive214713 - 21549227594.2
Trna-proNot AvailableNot AvailablePositive215602 - 215679Not Available
Trna-hisNot AvailableNot AvailablePositive215695 - 215771Not Available
Trna-argNot AvailableNot AvailablePositive215788 - 215864Not Available
Trna-leuNot AvailableNot AvailablePositive215869 - 215953Not Available
Trna-glyNot AvailableNot AvailablePositive215998 - 216074Not Available

Displaying genes 211 – 220 of 2561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.