Arcobacter pacificus SW028

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Arcobacter pacificus SW028 is a Gram-negative bacterium characterized by its rod shape. This species has been identified with a single replicon, which indicates its genomic structure is relatively simple compared to some other bacteria that may possess multiple replicons. The genomic information of Arcobacter pacificus SW028 is cataloged under the accession number CP035928.1, which serves as a reference for researchers interested in studying its genetic makeup and potential applications. As a member of the Arcobacter genus, A. pacificus may be associated with various ecological niches, particularly in aquatic environments. The traits of being Gram-negative and rod-shaped suggest that this bacterium could be adapted to thrive in diverse conditions, potentially contributing to nutrient cycling in its habitat. While specific ecological roles are not detailed in the provided traits, the presence of Arcobacter species in marine and freshwater contexts often implicates them in interactions with other microorganisms and their environments. Understanding the characteristics of Arcobacter pacificus SW028 can provide insights into its ecological significance and potential applications in biotechnology or environmental microbiology. Further research is needed to elucidate its specific interactions within ecosystems and its role in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter pacificus
StrainSW028

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arcobacter pacificus SW028, Complete Genome

Gene Summary

Adenine Count

950800 bp

Thymine Count

962148 bp

Guanine Count

373474 bp

Cytosine Count

371569 bp

Genome Length

2657991 bp

Protein-coding Genes

2491 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAPAC_2206Not AvailableNegative2197781 - 219820915117.7
phyh family dioxygenaseAPAC_2207O14832Positive2198381 - 219911528989.5
transcriptional accessory protein texAPAC_2208O31489Positive2199108 - 220121379096.3
hypothetical proteinAPAC_2209Not AvailablePositive2201234 - 220150010444.3
transposase, is256 familyAPAC_2210P80011Negative2201609 - 220282946324.9
crispr/cas system-associated endoribonuclease cas2, type ii-cAPAC_2211C7TEQ4Negative2204649 - 220496312384.6
crispr/cas system-associated endonuclease cas1, type ii-cAPAC_2212C9X1G6Negative2204996 - 220586833382.5
crispr/cas system-associated rna-guided endonuclease cas9, type ii-cAPAC_2213Q0P897Negative2205981 - 2209487136708.0
reactive intermediate/imine deaminaseAPAC_2214Q9UZA3Negative2209612 - 220999814082.8
von willebrand factor type a (vwa) domain-containing protein (ompa domain)APAC_2215P13794Positive2210136 - 221160855332.7

Displaying genes 2151 – 2160 of 2561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.