Sphingomonas lutea JS5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas lutea JS5 is characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This bacterium is notable for having two replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various environments. The strain is identified with two specific genomic accessions: CP060718.1 and CP071573.1, which can be used for further genetic and comparative studies. The ability to move via flagella suggests that Sphingomonas lutea JS5 may occupy ecological niches where motility provides a competitive advantage, such as in heterogeneous environments where nutrient availability varies. The presence of two replicons may also imply that this organism possesses mechanisms for efficient replication and regulation of its genetic material, which can be key to its survival strategies in diverse habitats. Overall, the traits of Sphingomonas lutea JS5, particularly its rod shape, motility through flagella, and unique genomic structure, indicate its potential ecological role in adapting to different environments and contributing to microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas lutea
StrainJS5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas lutea JS5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas lutea JS5, Complete Genome

Gene Summary

Adenine Count

417283 bp

Thymine Count

421002 bp

Guanine Count

788864 bp

Cytosine Count

790505 bp

Genome Length

2417654 bp

Protein-coding Genes

2457 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinH9L13_11505Not AvailableNegative2222202 - 222247710145.6
50s ribosomal protein l30H9L13_11510A5V5Y4Negative2222491 - 22226856996.62
30s ribosomal protein s5H9L13_11515A5V5Y5Negative2222691 - 222321818245.2
50s ribosomal protein l18H9L13_11520A5V5Y6Negative2223464 - 222381712474.0
50s ribosomal protein l6H9L13_11525Q2G8W5Negative2223821 - 222435419693.9
30s ribosomal protein s8H9L13_11530A5V5Y8Negative2224354 - 222474914410.4
30s ribosomal protein s14H9L13_11535A5V5Y9Negative2224760 - 222506511656.3
50s ribosomal protein l5H9L13_11540Q1GPB1Negative2225100 - 222577725290.6
50s ribosomal protein l24H9L13_11545Q2N9C2Negative2225770 - 222609011455.0
50s ribosomal protein l14H9L13_11550Q1GPA9Negative2226093 - 222646113316.5

Displaying genes 2301 – 2310 of 4856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.