Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | HY78_RS31030 | Not Available | Positive | 70 - 510 | 15945.5 |
| hypothetical protein | HY78_RS31035 | Not Available | Negative | 538 - 1230 | 25307.1 |
| recombinase family protein | HY78_RS31040 | Not Available | Negative | 1403 - 1957 | 19779.9 |
| endonuclease nucs domain-containing protein | HY78_RS31045 | Not Available | Negative | 2077 - 3444 | 51153.4 |
| dna-methyltransferase | HY78_RS31050 | Not Available | Negative | 3444 - 4544 | 40650.8 |
| higa family addiction module antitoxin | HY78_RS31055 | Not Available | Negative | 4577 - 4885 | 11422.1 |
| type ii toxin-antitoxin system rele/pare family toxin | HY78_RS31060 | Not Available | Negative | 5007 - 5321 | 11807.0 |
| mobq family relaxase | HY78_RS31065 | Not Available | Negative | 5362 - 6426 | 39343.9 |
| hypothetical protein | HY78_RS31070 | Not Available | Positive | 6651 - 6920 | 9935.93 |
| hypothetical protein | HY78_RS31075 | Not Available | Positive | 6920 - 7813 | 32005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
