Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1380 family transposase | HY78_RS28535 | Not Available | Negative | 130685 - 132055 | 50239.4 |
| duf3320 domain-containing protein | HY78_RS28540 | Not Available | Positive | 132187 - 135663 | 129645.0 |
| hypothetical protein | HY78_RS28545 | Not Available | Negative | 135832 - 136035 | 7846.28 |
| hypothetical protein | HY78_RS28550 | Not Available | Positive | 136224 - 136901 | 24865.1 |
| duf6088 family protein | HY78_RS28555 | Not Available | Negative | 136881 - 137513 | 22085.5 |
| relaxase/mobilization nuclease domain-containing protein | HY78_RS28560 | Not Available | Negative | 137652 - 138758 | 40772.7 |
| plasmid mobilization protein | HY78_RS28565 | Not Available | Negative | 138751 - 139287 | 19562.3 |
| parb/repb/spo0j family partition protein | HY78_RS28570 | Not Available | Negative | 139518 - 140465 | 33853.6 |
| para family protein | HY78_RS28575 | Not Available | Negative | 140465 - 141229 | 27506.3 |
| duf3768 domain-containing protein | HY78_RS28580 | Not Available | Negative | 141611 - 141979 | 13897.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
