Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | HY78_RS27985 | Not Available | Positive | 16994 - 17395 | 14753.8 |
| copper-binding protein | HY78_RS27990 | Not Available | Negative | 17423 - 17818 | 13257.2 |
| copper-binding protein | HY78_RS27995 | Not Available | Negative | 17887 - 18171 | 9678.9 |
| efflux rnd transporter permease subunit | HY78_RS28000 | Not Available | Negative | 18243 - 21398 | 113929.0 |
| efflux rnd transporter periplasmic adaptor subunit | HY78_RS28005 | Not Available | Negative | 21395 - 22885 | 51547.1 |
| tolc family protein | HY78_RS28010 | Not Available | Negative | 22882 - 24144 | 45226.9 |
| hypothetical protein | HY78_RS28015 | Not Available | Negative | 24208 - 24465 | 9011.87 |
| hypothetical protein | HY78_RS28020 | Not Available | Negative | 24543 - 24905 | 12088.0 |
| hypothetical protein | HY78_RS28025 | Not Available | Positive | 25167 - 25505 | 11778.2 |
| heavy metal-responsive transcriptional regulator | HY78_RS28030 | Not Available | Positive | 25646 - 26125 | 17695.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
