Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | HY78_RS22790 | Not Available | Negative | 4816047 - 4816499 | 16894.6 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | HY78_RS22795 | Not Available | Positive | 4816657 - 4817886 | 45051.5 |
| alpha-ketoacid dehydrogenase subunit beta | HY78_RS22800 | Not Available | Positive | 4817890 - 4818903 | 36447.5 |
| dihydrolipoamide acetyltransferase family protein | HY78_RS22805 | Not Available | Positive | 4818906 - 4820168 | 44759.9 |
| dihydrolipoyl dehydrogenase | HY78_RS22810 | Not Available | Positive | 4820172 - 4821572 | 48147.4 |
| branched-chain amino acid aminotransferase | HY78_RS22815 | Not Available | Positive | 4821645 - 4822724 | 38970.4 |
| duf2783 domain-containing protein | HY78_RS22820 | Not Available | Negative | 4822842 - 4823042 | 6995.52 |
| fad-dependent oxidoreductase | HY78_RS22825 | Not Available | Negative | 4823039 - 4824613 | 57208.7 |
| mbl fold metallo-hydrolase | HY78_RS22830 | Not Available | Negative | 4824620 - 4825579 | 35690.0 |
| helix-turn-helix transcriptional regulator | HY78_RS22835 | Not Available | Positive | 4825715 - 4826443 | 26741.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
