Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | HY78_RS20840 | Not Available | Negative | 4370469 - 4371872 | 50184.1 |
| carboxylesterase/lipase family protein | HY78_RS20845 | Not Available | Negative | 4371947 - 4373470 | 54028.9 |
| hsp20/alpha crystallin family protein | HY78_RS20850 | Not Available | Positive | 4373715 - 4374110 | 14646.7 |
| endopeptidase la | HY78_RS20855 | Not Available | Positive | 4374107 - 4376512 | 86675.6 |
| dha2 family efflux mfs transporter permease subunit | HY78_RS20860 | Not Available | Negative | 4376535 - 4378058 | 54820.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | HY78_RS20865 | Not Available | Negative | 4378064 - 4379188 | 39866.7 |
| efflux transporter outer membrane subunit | HY78_RS20870 | Not Available | Negative | 4379181 - 4380647 | 50664.1 |
| tetr/acrr family transcriptional regulator | HY78_RS20875 | Not Available | Positive | 4380739 - 4381371 | 23417.5 |
| acyltransferase family protein | HY78_RS20880 | Not Available | Positive | 4381537 - 4382622 | 40651.7 |
| 30s ribosomal protein s4 | HY78_RS20885 | Not Available | Negative | 4382746 - 4383360 | 23092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
