Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | HY78_RS20690 | Not Available | Positive | 4324435 - 4325547 | 39511.8 |
| voc family protein | HY78_RS20695 | Not Available | Positive | 4325576 - 4325974 | 13003.2 |
| s-formylglutathione hydrolase | HY78_RS20700 | Not Available | Positive | 4326040 - 4326891 | 30479.9 |
| threonine aldolase family protein | HY78_RS20705 | Not Available | Negative | 4327041 - 4328063 | 35665.1 |
| nuclear transport factor 2 family protein | HY78_RS20710 | Not Available | Negative | 4328068 - 4328469 | 14190.8 |
| indolepyruvate ferredoxin oxidoreductase family protein | HY78_RS20715 | Not Available | Negative | 4328509 - 4331982 | 124138.0 |
| lrp/asnc family transcriptional regulator | HY78_RS20720 | Not Available | Positive | 4332099 - 4332578 | 17861.7 |
| ompa family protein | HY78_RS20725 | Not Available | Positive | 4332751 - 4333638 | 31443.3 |
| rida family protein | HY78_RS20730 | Not Available | Negative | 4333783 - 4334193 | 15273.5 |
| carboxylesterase family protein | HY78_RS20735 | Not Available | Negative | 4334190 - 4335437 | 44835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
