Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | HY78_RS20640 | Not Available | Positive | 4315192 - 4315695 | 18987.3 |
| nad(p)/fad-dependent oxidoreductase | HY78_RS20645 | Not Available | Negative | 4315659 - 4316795 | 38766.0 |
| methyltransferase domain-containing protein | HY78_RS20650 | Not Available | Negative | 4316774 - 4317484 | 27016.6 |
| type iii polyketide synthase | HY78_RS20655 | Not Available | Negative | 4317484 - 4318539 | 36516.1 |
| sigma-54-dependent transcriptional regulator | HY78_RS20660 | Not Available | Negative | 4318709 - 4320151 | 51241.6 |
| aa3-type cytochrome c oxidase subunit iv | HY78_RS20665 | Not Available | Positive | 4320308 - 4320451 | 4950.06 |
| nad(p) transhydrogenase subunit alpha | HY78_RS20670 | Not Available | Positive | 4320456 - 4321589 | 38689.3 |
| proton-translocating transhydrogenase family protein | HY78_RS20675 | Not Available | Positive | 4321612 - 4321902 | 10134.8 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | HY78_RS20680 | Not Available | Positive | 4321925 - 4323343 | 49354.0 |
| lysr family transcriptional regulator | HY78_RS20685 | Not Available | Negative | 4323359 - 4324339 | 35906.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
