Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | HY78_RS20590 | Not Available | Negative | 4307071 - 4307619 | 19503.2 |
| o-succinylhomoserine sulfhydrylase | HY78_RS20595 | Not Available | Positive | 4307778 - 4308986 | 43335.0 |
| co2+/mg2+ efflux protein apag | HY78_RS20600 | Not Available | Positive | 4308989 - 4309387 | 14588.4 |
| lysr family transcriptional regulator | HY78_RS20605 | Not Available | Positive | 4309403 - 4310188 | 27614.0 |
| hypothetical protein | HY78_RS20610 | Not Available | Positive | 4310219 - 4310476 | 9590.41 |
| dihydrofolate reductase family protein | HY78_RS20615 | Not Available | Negative | 4310473 - 4311033 | 20625.7 |
| cytochrome-c peroxidase | HY78_RS20620 | Not Available | Negative | 4311065 - 4312066 | 35609.4 |
| homogentisate 1,2-dioxygenase | HY78_RS20625 | Not Available | Negative | 4312069 - 4312572 | 16735.4 |
| tonb-dependent receptor | HY78_RS20630 | Not Available | Positive | 4312559 - 4314793 | 82380.2 |
| arsr/smtb family transcription factor | HY78_RS20635 | Not Available | Positive | 4314876 - 4315214 | 12613.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
