Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ampg family muropeptide mfs transporter | HY78_RS20540 | Not Available | Negative | 4297984 - 4299327 | 47163.2 |
| hypothetical protein | HY78_RS20545 | Not Available | Negative | 4299377 - 4299796 | 15537.7 |
| hypothetical protein | HY78_RS20550 | Not Available | Positive | 4299940 - 4300383 | 15248.5 |
| dicarboxylate/amino acid:cation symporter | HY78_RS20555 | Not Available | Positive | 4300564 - 4301829 | 45243.5 |
| putative quinol monooxygenase | HY78_RS20560 | Not Available | Negative | 4301952 - 4302245 | 10733.8 |
| n-carbamoylputrescine amidase | HY78_RS20565 | Not Available | Negative | 4302257 - 4303105 | 31205.0 |
| agmatine deiminase family protein | HY78_RS20570 | Not Available | Negative | 4303119 - 4304117 | 34933.8 |
| sdr family oxidoreductase | HY78_RS20575 | Not Available | Positive | 4304156 - 4305262 | 39951.1 |
| nucleotide sugar dehydrogenase | HY78_RS20580 | Not Available | Positive | 4305290 - 4306567 | 45613.8 |
| group ii truncated hemoglobin | HY78_RS20585 | Not Available | Positive | 4306651 - 4307064 | 14583.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
