Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS20440 | Not Available | Negative | 4281059 - 4281733 | 24127.4 |
| response regulator | HY78_RS20445 | Not Available | Negative | 4281741 - 4282184 | 15930.2 |
| pyruvate dehydrogenase complex e1 component subunit beta | HY78_RS20450 | Not Available | Negative | 4282293 - 4283693 | 49619.4 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | HY78_RS20455 | Not Available | Negative | 4283693 - 4284700 | 36999.0 |
| type ii toxin-antitoxin system vapc family toxin | HY78_RS20460 | Not Available | Negative | 4284953 - 4285339 | 13902.9 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HY78_RS20465 | Not Available | Negative | 4285336 - 4285569 | 8468.2 |
| ftsb family cell division protein | HY78_RS20470 | Not Available | Negative | 4285636 - 4285944 | 11293.7 |
| uracil-dna glycosylase | HY78_RS20475 | Not Available | Negative | 4285976 - 4286674 | 24862.6 |
| membrane protein | HY78_RS20480 | Not Available | Positive | 4286839 - 4287480 | 23171.9 |
| hypothetical protein | HY78_RS20485 | Not Available | Positive | 4287492 - 4288952 | 51850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
