Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | HY78_RS20390 | Not Available | Positive | 4272610 - 4272948 | 11684.0 |
| mbl fold metallo-hydrolase | HY78_RS20395 | Not Available | Positive | 4272974 - 4273936 | 35678.7 |
| chase2 domain-containing protein | HY78_RS20400 | Not Available | Positive | 4274081 - 4276096 | 70712.1 |
| ompa family protein | HY78_RS20405 | Not Available | Negative | 4276246 - 4276836 | 20868.1 |
| fecr domain-containing protein | HY78_RS20410 | Not Available | Negative | 4276833 - 4277264 | 15349.7 |
| atp-binding protein | HY78_RS20415 | Not Available | Positive | 4277311 - 4277730 | 14082.5 |
| prolipoprotein diacylglyceryl transferase | HY78_RS20420 | Not Available | Positive | 4277813 - 4278652 | 30825.8 |
| class i sam-dependent methyltransferase | HY78_RS20425 | Not Available | Positive | 4278841 - 4279896 | 37847.8 |
| hypothetical protein | HY78_RS20430 | Not Available | Negative | 4279955 - 4280584 | 23231.5 |
| ef-hand domain-containing protein | HY78_RS20435 | Not Available | Negative | 4280586 - 4281023 | 15687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
