Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | HY78_RS20290 | Not Available | Negative | 4248454 - 4249707 | 45365.8 |
| dethiobiotin synthase | HY78_RS20295 | Not Available | Negative | 4249704 - 4250333 | 21911.4 |
| 8-amino-7-oxononanoate synthase | HY78_RS20300 | Not Available | Negative | 4250330 - 4251439 | 38666.2 |
| nucleotide exchange factor grpe | HY78_RS20305 | Not Available | Positive | 4251567 - 4252112 | 19779.4 |
| sulfotransferase family protein | HY78_RS20310 | Not Available | Negative | 4252261 - 4253187 | 34741.3 |
| copper chaperone pcu(a)c | HY78_RS20315 | Not Available | Negative | 4253187 - 4253639 | 15407.9 |
| molecular chaperone dnak | HY78_RS20320 | Not Available | Positive | 4253800 - 4255692 | 67374.9 |
| molecular chaperone dnaj | HY78_RS20325 | Not Available | Positive | 4255827 - 4256969 | 40885.0 |
| duf3857 domain-containing protein | HY78_RS20330 | Not Available | Negative | 4257040 - 4260258 | 117928.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | HY78_RS20335 | Not Available | Positive | 4260455 - 4260946 | 17335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
