Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | HY78_RS20040 | Not Available | Negative | 4197460 - 4198791 | 48969.9 |
| hypothetical protein | HY78_RS20045 | Not Available | Positive | 4198733 - 4199425 | 25012.6 |
| lipopolysaccharide biosynthesis protein | HY78_RS20050 | Not Available | Negative | 4199420 - 4200946 | 53295.6 |
| succinate dehydrogenase iron-sulfur subunit | HY78_RS20055 | Not Available | Positive | 4201066 - 4201851 | 29376.3 |
| paai family thioesterase | HY78_RS20060 | Not Available | Positive | 4201916 - 4202320 | 14672.8 |
| cell division protein zape | HY78_RS20065 | Not Available | Positive | 4202317 - 4203435 | 41199.0 |
| chat domain-containing tetratricopeptide repeat protein | HY78_RS20070 | Not Available | Negative | 4203506 - 4206475 | 105341.0 |
| malate dehydrogenase | HY78_RS20075 | Not Available | Positive | 4206739 - 4207701 | 33338.4 |
| succinate--coa ligase subunit alpha | HY78_RS20080 | Not Available | Positive | 4207753 - 4208637 | 30059.3 |
| 2-oxoglutarate dehydrogenase e1 component | HY78_RS20085 | Not Available | Positive | 4208764 - 4211676 | 106904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
