Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | HY78_RS19940 | Not Available | Positive | 4175890 - 4176279 | 13944.7 |
| dna-directed rna polymerase subunit alpha | HY78_RS19945 | Not Available | Positive | 4176362 - 4177423 | 38002.6 |
| 50s ribosomal protein l17 | HY78_RS19950 | Not Available | Positive | 4177600 - 4178022 | 15495.7 |
| prolyl oligopeptidase family serine peptidase | HY78_RS19955 | Not Available | Positive | 4178138 - 4180270 | 79103.5 |
| pqq-binding-like beta-propeller repeat protein | HY78_RS19960 | Not Available | Positive | 4180403 - 4182322 | 66808.3 |
| hypothetical protein | HY78_RS19965 | Not Available | Positive | 4182420 - 4182899 | 16639.5 |
| glutamine-hydrolyzing gmp synthase | HY78_RS19970 | Not Available | Positive | 4183008 - 4184600 | 57675.1 |
| ycii family protein | HY78_RS19975 | Not Available | Positive | 4185067 - 4185435 | 13544.3 |
| type ii toxin-antitoxin system vapc family toxin | HY78_RS19980 | Not Available | Negative | 4185466 - 4185894 | 15127.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HY78_RS19985 | Not Available | Negative | 4185891 - 4186133 | 8854.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
