Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate abc transporter permease | HY78_RS19740 | Not Available | Positive | 4147194 - 4148520 | 46604.8 |
| acyl-coa thioesterase | HY78_RS19745 | Not Available | Positive | 4148517 - 4148909 | 13740.6 |
| dihydrolipoyl dehydrogenase | HY78_RS19750 | Not Available | Positive | 4148925 - 4150322 | 49922.5 |
| hypothetical protein | HY78_RS19755 | Not Available | Positive | 4150327 - 4150653 | 11802.5 |
| d-alanyl-d-alanine carboxypeptidase family protein | HY78_RS19760 | Not Available | Negative | 4150896 - 4151822 | 32532.1 |
| murein l,d-transpeptidase catalytic domain family protein | HY78_RS19765 | Not Available | Negative | 4151979 - 4152617 | 22624.0 |
| l,d-transpeptidase family protein | HY78_RS19770 | Not Available | Negative | 4152770 - 4154026 | 45234.8 |
| cation diffusion facilitator family transporter | HY78_RS19775 | Not Available | Positive | 4154183 - 4155109 | 33023.0 |
| divalent-cation tolerance protein cuta | HY78_RS19780 | Not Available | Positive | 4155106 - 4155417 | 11249.6 |
| 30s ribosomal protein s12 | HY78_RS19785 | Not Available | Positive | 4155667 - 4156038 | 13951.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
