Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | HY78_RS19690 | Not Available | Negative | 4141034 - 4141657 | 22246.6 |
| rlua family pseudouridine synthase | HY78_RS19695 | Not Available | Positive | 4141710 - 4142462 | 27157.9 |
| arac family transcriptional regulator | HY78_RS19700 | Not Available | Negative | 4142466 - 4143383 | 32253.3 |
| sdr family oxidoreductase | HY78_RS19705 | Not Available | Positive | 4143483 - 4144313 | 29535.2 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | HY78_RS19710 | Not Available | Negative | 4144310 - 4144732 | 15517.8 |
| hxxee domain-containing protein | HY78_RS19715 | Not Available | Negative | 4144774 - 4145250 | 17034.0 |
| gaf domain-containing protein | HY78_RS19720 | Not Available | Positive | 4145321 - 4145818 | 17574.1 |
| nucleotidyltransferase family protein | HY78_RS19725 | Not Available | Positive | 4145912 - 4146208 | 11164.3 |
| duf86 domain-containing protein | HY78_RS19730 | Not Available | Positive | 4146208 - 4146579 | 14017.6 |
| universal stress protein | HY78_RS19735 | Not Available | Negative | 4146603 - 4147058 | 15905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
