Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HY78_RS19640 | Not Available | Negative | 4129851 - 4130642 | 28228.0 |
| hypothetical protein | HY78_RS19645 | Not Available | Positive | 4130754 - 4131383 | 21894.4 |
| hypothetical protein | HY78_RS19650 | Not Available | Positive | 4131391 - 4131780 | 14372.5 |
| hypothetical protein | HY78_RS19655 | Not Available | Negative | 4131790 - 4132593 | 28066.4 |
| caspase family protein | HY78_RS19660 | Not Available | Negative | 4132734 - 4133081 | 11356.8 |
| tetratricopeptide repeat protein | HY78_RS19665 | Not Available | Positive | 4133233 - 4134525 | 46093.0 |
| hypothetical protein | HY78_RS19670 | Not Available | Positive | 4134528 - 4136888 | 78218.3 |
| chat domain-containing protein | HY78_RS19675 | Not Available | Negative | 4136976 - 4139789 | 98554.6 |
| sulfonate abc transporter permease | HY78_RS19680 | Not Available | Negative | 4139903 - 4140292 | 14137.6 |
| aminoacyl-trna hydrolase | HY78_RS19685 | Not Available | Negative | 4140304 - 4140873 | 20661.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
