Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | HY78_RS19590 | Not Available | Negative | 4120711 - 4121571 | 31657.0 |
| trna (cytidine(34)-2'-o)-methyltransferase | HY78_RS19595 | Not Available | Negative | 4121568 - 4122017 | 15899.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | HY78_RS19600 | Not Available | Positive | 4122211 - 4122777 | 19968.0 |
| cytochrome b | HY78_RS19605 | Not Available | Positive | 4122789 - 4124054 | 47149.2 |
| cytochrome c1 | HY78_RS19610 | Not Available | Positive | 4124071 - 4124913 | 30526.6 |
| s-methyl-5'-thioadenosine phosphorylase | HY78_RS19615 | Not Available | Positive | 4124993 - 4125856 | 29802.7 |
| maoc family dehydratase | HY78_RS19620 | Not Available | Negative | 4125987 - 4126439 | 17070.1 |
| redox-regulated atpase ychf | HY78_RS19625 | Not Available | Negative | 4126503 - 4127603 | 38954.4 |
| hypothetical protein | HY78_RS19630 | Not Available | Negative | 4127735 - 4128379 | 21493.8 |
| sensor histidine kinase | HY78_RS19635 | Not Available | Negative | 4128490 - 4129854 | 48295.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
