Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1595 family transposase | HY78_RS19490 | Not Available | Negative | 4104091 - 4105113 | 37810.0 |
| hypothetical protein | HY78_RS19495 | Not Available | Negative | 4105211 - 4105747 | 19561.4 |
| class i sam-dependent methyltransferase | HY78_RS19500 | Not Available | Negative | 4105810 - 4106676 | 32460.6 |
| m16 family metallopeptidase | HY78_RS19505 | Not Available | Negative | 4106806 - 4108038 | 44274.6 |
| threonine synthase | HY78_RS19510 | Not Available | Negative | 4108044 - 4109444 | 49844.7 |
| gfa family protein | HY78_RS19515 | Not Available | Negative | 4109527 - 4109985 | 16777.1 |
| sgcj/ecac family oxidoreductase | HY78_RS19520 | Not Available | Positive | 4110131 - 4110568 | 15999.8 |
| gnat family n-acetyltransferase | HY78_RS19525 | Not Available | Negative | 4110576 - 4110983 | 15474.2 |
| aspartate aminotransferase family protein | HY78_RS19530 | Not Available | Positive | 4111176 - 4112366 | 42334.9 |
| ornithine carbamoyltransferase | HY78_RS19535 | Not Available | Positive | 4112363 - 4113292 | 33407.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
