Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | HY78_RS19440 | Not Available | Positive | 4094926 - 4095690 | 26330.4 |
| amino acid deaminase | HY78_RS19445 | Not Available | Positive | 4095727 - 4097004 | 46316.7 |
| Trna-arg | Not Available | Not Available | Positive | 4097254 - 4097330 | Not Available |
| hypothetical protein | HY78_RS19455 | Not Available | Positive | 4097413 - 4097958 | 18380.8 |
| s9 family peptidase | HY78_RS19460 | Not Available | Positive | 4097998 - 4100109 | 77274.1 |
| heme exporter protein ccmb | HY78_RS19465 | Not Available | Negative | 4100235 - 4100882 | 21304.9 |
| heme abc exporter atp-binding protein ccma | HY78_RS19470 | Not Available | Negative | 4100879 - 4101463 | 19444.9 |
| metallopeptidase family protein | HY78_RS19475 | Not Available | Negative | 4101463 - 4101864 | 14394.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | HY78_RS19480 | Not Available | Positive | 4101914 - 4102207 | 10949.5 |
| hypothetical protein | HY78_RS19485 | Not Available | Negative | 4103681 - 4103875 | 6474.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
