Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HY78_RS19390 | Not Available | Negative | 4079963 - 4082212 | 81742.9 |
| tvp38/tmem64 family protein | HY78_RS19395 | Not Available | Positive | 4082439 - 4083059 | 22258.8 |
| mosc domain-containing protein | HY78_RS19400 | Not Available | Negative | 4083139 - 4084899 | 64570.4 |
| gamma-glutamyltransferase family protein | HY78_RS19405 | Not Available | Negative | 4084937 - 4086520 | 56176.7 |
| luxr c-terminal-related transcriptional regulator | HY78_RS19410 | Not Available | Negative | 4086697 - 4089213 | 92708.3 |
| nuclear transport factor 2 family protein | HY78_RS19415 | Not Available | Negative | 4089375 - 4089875 | 18841.2 |
| helix-turn-helix domain-containing protein | HY78_RS19420 | Not Available | Positive | 4090087 - 4090866 | 28715.3 |
| nad(p)/fad-dependent oxidoreductase | HY78_RS19425 | Not Available | Positive | 4090955 - 4092106 | 40066.7 |
| m81 family metallopeptidase | HY78_RS19430 | Not Available | Positive | 4092103 - 4093635 | 54168.5 |
| mfs transporter | HY78_RS19435 | Not Available | Positive | 4093628 - 4094881 | 43418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
