Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | HY78_RS19240 | Not Available | Positive | 4046559 - 4049246 | 95991.4 |
| response regulator transcription factor | HY78_RS19245 | Not Available | Positive | 4049243 - 4049911 | 24439.5 |
| merc domain-containing protein | HY78_RS19250 | Not Available | Positive | 4049992 - 4050369 | 12908.3 |
| fur family transcriptional regulator | HY78_RS19255 | Not Available | Positive | 4050408 - 4050884 | 16820.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HY78_RS19260 | Not Available | Positive | 4050932 - 4052851 | 67800.3 |
| flagellar biosynthetic protein flio | HY78_RS19265 | Not Available | Negative | 4053019 - 4053306 | 10417.1 |
| flagellar motor switch protein flin | HY78_RS19270 | Not Available | Negative | 4053303 - 4053626 | 11350.8 |
| flagellar motor switch protein flim | HY78_RS19275 | Not Available | Negative | 4053623 - 4054618 | 36844.3 |
| outer membrane protein assembly factor bamd | HY78_RS19280 | Not Available | Negative | 4054952 - 4055737 | 29823.5 |
| glycosyltransferase | HY78_RS19285 | Not Available | Positive | 4055829 - 4057007 | 41542.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
