Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | HY78_RS19090 | Not Available | Negative | 4008606 - 4009004 | 14142.0 |
| stas domain-containing protein | HY78_RS19095 | Not Available | Positive | 4009003 - 4009458 | 15792.9 |
| hypothetical protein | HY78_RS19100 | Not Available | Negative | 4009581 - 4010759 | 40632.2 |
| crp/fnr family transcriptional regulator | HY78_RS19105 | Not Available | Negative | 4010756 - 4011121 | 12556.5 |
| hamp domain-containing protein | HY78_RS19110 | Not Available | Negative | 4010919 - 4012244 | 47467.0 |
| mfs transporter | HY78_RS19115 | Not Available | Negative | 4012234 - 4014645 | 87442.4 |
| pp2c family protein-serine/threonine phosphatase | HY78_RS19120 | Not Available | Positive | 4014881 - 4016488 | 59334.0 |
| hypothetical protein | HY78_RS19125 | Not Available | Negative | 4016578 - 4018347 | 63668.9 |
| esterase-like activity of phytase family protein | HY78_RS19130 | Not Available | Negative | 4018458 - 4019930 | 52722.8 |
| tonb-dependent receptor | HY78_RS19135 | Not Available | Negative | 4019920 - 4022253 | 83775.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
