Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter domain-containing protein | HY78_RS19040 | Not Available | Negative | 3993493 - 3996702 | 106768.0 |
| tonb-dependent receptor | HY78_RS19045 | Not Available | Negative | 3996906 - 3999311 | 85259.4 |
| fecr family protein | HY78_RS19050 | Not Available | Negative | 3999308 - 4000255 | 34035.2 |
| rna polymerase sigma factor | HY78_RS19055 | Not Available | Negative | 4000297 - 4000809 | 18862.2 |
| hypothetical protein | HY78_RS19060 | Not Available | Negative | 4000961 - 4002361 | 48027.9 |
| transporter | HY78_RS19065 | Not Available | Positive | 4002516 - 4003511 | 36760.2 |
| dienelactone hydrolase family protein | HY78_RS19070 | Not Available | Positive | 4003656 - 4004396 | 26610.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HY78_RS19075 | Not Available | Positive | 4004684 - 4006909 | 81816.2 |
| diaminopimelate decarboxylase | HY78_RS19080 | Not Available | Negative | 4006898 - 4008106 | 43307.5 |
| set domain-containing protein-lysine n-methyltransferase | HY78_RS19085 | Not Available | Negative | 4008093 - 4008560 | 17036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
