Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | HY78_RS18555 | Not Available | Positive | 3913753 - 3914781 | 36034.8 |
| lipoyl domain-containing protein | HY78_RS18560 | Not Available | Positive | 3914800 - 3915033 | 8466.09 |
| is1380 family transposase | HY78_RS18565 | Not Available | Positive | 3915485 - 3916855 | 50239.4 |
| sulfonate abc transporter permease | HY78_RS18570 | Not Available | Negative | 3917022 - 3918199 | 42287.8 |
| duf2513 domain-containing protein | HY78_RS18575 | Not Available | Positive | 3918440 - 3918724 | 10372.6 |
| recombinase family protein | HY78_RS18580 | Not Available | Positive | 3918757 - 3920244 | 55207.6 |
| accessory factor ubik family protein | HY78_RS18585 | Not Available | Negative | 3920285 - 3920530 | 8946.68 |
| tspo/mbr family protein | HY78_RS18590 | Not Available | Negative | 3920558 - 3921112 | 20386.8 |
| tlya family rna methyltransferase | HY78_RS18595 | Not Available | Negative | 3921105 - 3921863 | 27027.6 |
| Trna-val | Not Available | Not Available | Positive | 3921881 - 3921956 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
