Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | HY78_RS18405 | Not Available | Positive | 3880366 - 3881682 | 49021.0 |
| alpha/beta hydrolase | HY78_RS18410 | Not Available | Negative | 3881758 - 3882738 | 35237.2 |
| gntr family transcriptional regulator | HY78_RS18415 | Not Available | Negative | 3882866 - 3883708 | 31738.5 |
| coa transferase subunit a | HY78_RS18420 | Not Available | Positive | 3883931 - 3884638 | 25302.4 |
| 3-oxoacid coa-transferase subunit b | HY78_RS18425 | Not Available | Positive | 3884638 - 3885282 | 23035.8 |
| hypothetical protein | HY78_RS18430 | Not Available | Positive | 3885279 - 3885620 | 12512.5 |
| tonb-dependent receptor | HY78_RS18435 | Not Available | Negative | 3886356 - 3888578 | 80141.0 |
| nuclear transport factor 2 family protein | HY78_RS18440 | Not Available | Negative | 3889042 - 3889548 | 18281.7 |
| llm class flavin-dependent oxidoreductase | HY78_RS18445 | Not Available | Negative | 3889549 - 3890790 | 45454.0 |
| phytanoyl-coa dioxygenase family protein | HY78_RS18450 | Not Available | Negative | 3890977 - 3892212 | 44857.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
