Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fas1-like dehydratase domain-containing protein | HY78_RS18255 | Not Available | Negative | 3841703 - 3842560 | 31566.6 |
| acyl-coa dehydrogenase family protein | HY78_RS18260 | Not Available | Negative | 3842564 - 3844159 | 56920.2 |
| acetyl-coa c-acetyltransferase | HY78_RS18265 | Not Available | Negative | 3844159 - 3845376 | 43008.5 |
| coa transferase | HY78_RS18270 | Not Available | Negative | 3845373 - 3846572 | 42601.7 |
| iclr family transcriptional regulator | HY78_RS18275 | Not Available | Positive | 3847001 - 3847981 | 34821.2 |
| phytanoyl-coa dioxygenase family protein | HY78_RS18280 | Not Available | Positive | 3848613 - 3849554 | 34279.0 |
| hypothetical protein | HY78_RS18285 | Not Available | Positive | 3849649 - 3850134 | 16918.6 |
| llm class flavin-dependent oxidoreductase | HY78_RS18290 | Not Available | Positive | 3850419 - 3851627 | 44618.3 |
| tonb-dependent receptor plug domain-containing protein | HY78_RS18295 | Not Available | Positive | 3852122 - 3853396 | 46093.8 |
| is1380 family transposase | HY78_RS18300 | Not Available | Positive | 3853477 - 3854847 | 50239.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
