Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | HY78_RS18055 | Not Available | Positive | 3798246 - 3799226 | 36844.0 |
| is21 family transposase | HY78_RS18060 | Not Available | Positive | 3799299 - 3800813 | 57437.9 |
| is21-like element helper atpase istb | HY78_RS18065 | Not Available | Positive | 3800800 - 3801528 | 26672.3 |
| hypothetical protein | HY78_RS18070 | Not Available | Positive | 3801768 - 3801956 | 6948.48 |
| is1380 family transposase | HY78_RS18075 | Not Available | Positive | 3802015 - 3803385 | 50239.4 |
| amidohydrolase family protein | HY78_RS18080 | Not Available | Positive | 3804406 - 3805548 | 42472.2 |
| gntr family transcriptional regulator | HY78_RS18085 | Not Available | Positive | 3805774 - 3806718 | 35623.1 |
| zinc-dependent alcohol dehydrogenase | HY78_RS18090 | Not Available | Positive | 3806940 - 3808022 | 37379.4 |
| pep-utilizing enzyme | HY78_RS18095 | Not Available | Positive | 3808413 - 3809150 | 26969.9 |
| hypothetical protein | HY78_RS18100 | Not Available | Positive | 3809147 - 3809611 | 18076.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
