Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | HY78_RS17655 | Not Available | Negative | 3707130 - 3707813 | 25925.6 |
| aspartate/glutamate racemase family protein | HY78_RS17660 | Not Available | Positive | 3708249 - 3708959 | 25725.9 |
| nuclear transport factor 2 family protein | HY78_RS17665 | Not Available | Positive | 3708959 - 3709393 | 16333.1 |
| nuclear transport factor 2 family protein | HY78_RS17670 | Not Available | Positive | 3709393 - 3709791 | 15159.0 |
| tonb-dependent receptor | HY78_RS17675 | Not Available | Positive | 3709818 - 3712310 | 89988.7 |
| hydroxymethylglutaryl-coa lyase | HY78_RS17680 | Not Available | Positive | 3712401 - 3713318 | 31799.3 |
| hydantoinase/oxoprolinase family protein | HY78_RS17685 | Not Available | Positive | 3713329 - 3715377 | 72245.7 |
| hydantoinase b/oxoprolinase family protein | HY78_RS17690 | Not Available | Positive | 3715389 - 3717269 | 68814.3 |
| caib/baif coa transferase family protein | HY78_RS17695 | Not Available | Positive | 3717280 - 3718479 | 43209.7 |
| isochorismatase family protein | HY78_RS17700 | Not Available | Positive | 3718494 - 3719132 | 22459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
