Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | HY78_RS17355 | Not Available | Negative | 3636933 - 3637565 | 22525.2 |
| class i sam-dependent methyltransferase | HY78_RS17360 | Not Available | Positive | 3637822 - 3638670 | 30429.5 |
| type i methionyl aminopeptidase | HY78_RS17365 | Not Available | Negative | 3638770 - 3639594 | 29663.4 |
| l-lactate dehydrogenase | HY78_RS17370 | Not Available | Negative | 3639642 - 3640829 | 42418.5 |
| nad(p)-dependent oxidoreductase | HY78_RS17375 | Not Available | Negative | 3640855 - 3641808 | 34061.1 |
| 4-hydroxy-2-oxovalerate aldolase | HY78_RS17380 | Not Available | Negative | 3641805 - 3642854 | 37702.1 |
| acetaldehyde dehydrogenase (acetylating) | HY78_RS17385 | Not Available | Negative | 3642851 - 3643795 | 33140.9 |
| 2-keto-4-pentenoate hydratase | HY78_RS17390 | Not Available | Negative | 3643798 - 3644577 | 27720.1 |
| iclr family transcriptional regulator | HY78_RS17395 | Not Available | Positive | 3644591 - 3645466 | 31444.4 |
| laci family dna-binding transcriptional regulator | HY78_RS17400 | Not Available | Negative | 3645506 - 3646519 | 36672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
