Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS17155 | Not Available | Negative | 3588633 - 3589706 | 40174.2 |
| fumarylacetoacetase | HY78_RS17160 | Not Available | Negative | 3589849 - 3591138 | 46222.1 |
| fad-dependent monooxygenase | HY78_RS17165 | Not Available | Negative | 3591135 - 3592256 | 39606.6 |
| amidohydrolase family protein | HY78_RS17170 | Not Available | Negative | 3592262 - 3593380 | 39886.9 |
| cupin domain-containing protein | HY78_RS17175 | Not Available | Negative | 3593377 - 3593937 | 20224.7 |
| fumarylacetoacetate hydrolase family protein | HY78_RS17180 | Not Available | Negative | 3593934 - 3594911 | 35507.3 |
| voc family protein | HY78_RS17185 | Not Available | Negative | 3594925 - 3595830 | 33489.1 |
| acetoacetate decarboxylase family protein | HY78_RS17190 | Not Available | Negative | 3595862 - 3596680 | 30721.7 |
| tetr/acrr family transcriptional regulator | HY78_RS17195 | Not Available | Positive | 3596947 - 3597597 | 24641.7 |
| mfs transporter | HY78_RS17200 | Not Available | Positive | 3597704 - 3599038 | 46565.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
