Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export family protein | HY78_RS17055 | Not Available | Negative | 3561474 - 3562679 | 43481.1 |
| nitrate/nitrite transporter | HY78_RS17060 | Not Available | Negative | 3562739 - 3563983 | 42719.0 |
| cmpa/nrta family abc transporter substrate-binding protein | HY78_RS17065 | Not Available | Negative | 3564176 - 3565408 | 44216.2 |
| antar domain-containing response regulator | HY78_RS17070 | Not Available | Negative | 3565405 - 3565986 | 21054.6 |
| tonb-dependent receptor | HY78_RS17075 | Not Available | Positive | 3566059 - 3568425 | 84788.2 |
| mfs transporter | HY78_RS17080 | Not Available | Positive | 3568427 - 3569677 | 43587.9 |
| pas domain s-box protein | HY78_RS17085 | Not Available | Positive | 3569727 - 3572069 | 84565.1 |
| sugar kinase | HY78_RS17090 | Not Available | Negative | 3572110 - 3573147 | 36013.0 |
| sdr family oxidoreductase | HY78_RS17095 | Not Available | Negative | 3573128 - 3574024 | 31632.4 |
| duf819 family protein | HY78_RS17100 | Not Available | Negative | 3574021 - 3575151 | 39761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
