Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | HY78_RS16755 | Not Available | Positive | 3490185 - 3490865 | 24446.3 |
| amidohydrolase family protein | HY78_RS16760 | Not Available | Negative | 3490877 - 3492355 | 54060.9 |
| acyl-coa dehydrogenase family protein | HY78_RS16765 | Not Available | Negative | 3492393 - 3493535 | 41874.7 |
| acyl-coa synthetase | HY78_RS16770 | Not Available | Negative | 3493578 - 3495116 | 56703.5 |
| gfo/idh/moca family protein | HY78_RS16775 | Not Available | Negative | 3495226 - 3496413 | 40908.8 |
| amp-binding protein | HY78_RS16780 | Not Available | Negative | 3496410 - 3498062 | 60035.2 |
| caib/baif coa transferase family protein | HY78_RS16785 | Not Available | Positive | 3498410 - 3499612 | 42855.4 |
| 2fe-2s iron-sulfur cluster-binding protein | HY78_RS16790 | Not Available | Positive | 3499709 - 3500029 | 11415.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS16795 | Not Available | Positive | 3500053 - 3501339 | 48305.2 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | HY78_RS16800 | Not Available | Positive | 3501345 - 3501872 | 19909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
