Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HY78_RS16705 | Not Available | Positive | 3475434 - 3477638 | 81044.5 |
| amidohydrolase family protein | HY78_RS16710 | Not Available | Positive | 3477676 - 3480708 | 109170.0 |
| amidohydrolase family protein | HY78_RS16715 | Not Available | Positive | 3480713 - 3483757 | 111955.0 |
| enoyl-coa hydratase-related protein | HY78_RS16720 | Not Available | Negative | 3483774 - 3484544 | 27363.3 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS16725 | Not Available | Negative | 3484553 - 3485332 | 26703.2 |
| acetyl-coa c-acetyltransferase | HY78_RS16730 | Not Available | Positive | 3485530 - 3486783 | 43825.4 |
| 3-keto-5-aminohexanoate cleavage protein | HY78_RS16735 | Not Available | Positive | 3486806 - 3487765 | 35756.7 |
| nuclear transport factor 2 family protein | HY78_RS16740 | Not Available | Positive | 3487762 - 3488181 | 14969.7 |
| tetr/acrr family transcriptional regulator | HY78_RS16745 | Not Available | Positive | 3488277 - 3488957 | 25370.7 |
| amidohydrolase family protein | HY78_RS16750 | Not Available | Positive | 3489019 - 3490155 | 43325.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
