Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | HY78_RS16655 | Not Available | Positive | 3466738 - 3467256 | 19376.7 |
| amidohydrolase family protein | HY78_RS16660 | Not Available | Positive | 3467272 - 3468651 | 49782.6 |
| lysr family transcriptional regulator | HY78_RS16665 | Not Available | Positive | 3468676 - 3469602 | 32871.4 |
| duf2938 domain-containing protein | HY78_RS16670 | Not Available | Positive | 3469727 - 3470218 | 16822.0 |
| dioxygenase | HY78_RS16675 | Not Available | Positive | 3470218 - 3471081 | 31392.7 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS16680 | Not Available | Positive | 3471078 - 3471830 | 25026.0 |
| 3-keto-5-aminohexanoate cleavage protein | HY78_RS16685 | Not Available | Positive | 3471839 - 3472714 | 30972.6 |
| quinone oxidoreductase family protein | HY78_RS16690 | Not Available | Positive | 3472727 - 3473692 | 33503.2 |
| cupin domain-containing protein | HY78_RS16695 | Not Available | Positive | 3473746 - 3474051 | 10776.9 |
| lysr substrate-binding domain-containing protein | HY78_RS16700 | Not Available | Positive | 3474125 - 3475180 | 38174.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
