Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS16555 | Not Available | Negative | 3447380 - 3448288 | 34480.4 |
| hypothetical protein | HY78_RS16560 | Not Available | Negative | 3448291 - 3449523 | 46022.2 |
| sphingomyelin phosphodiesterase | HY78_RS16565 | Not Available | Positive | 3449612 - 3450703 | 39042.3 |
| enoyl-coa hydratase-related protein | HY78_RS16570 | Not Available | Negative | 3450713 - 3451486 | 27505.4 |
| mucr family transcriptional regulator | HY78_RS16575 | Not Available | Negative | 3451608 - 3452054 | 16265.9 |
| cytochrome-c oxidase, cbb3-type subunit i | HY78_RS16580 | Not Available | Positive | 3452391 - 3454037 | 61376.1 |
| cytochrome-c oxidase, cbb3-type subunit ii | HY78_RS16585 | Not Available | Positive | 3454044 - 3454769 | 26658.7 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | HY78_RS16590 | Not Available | Positive | 3454776 - 3454946 | 6403.75 |
| cytochrome-c oxidase, cbb3-type subunit iii | HY78_RS16595 | Not Available | Positive | 3454937 - 3455815 | 31694.6 |
| duf2189 domain-containing protein | HY78_RS16600 | Not Available | Positive | 3455995 - 3456777 | 28151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
