Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | HY78_RS16355 | Not Available | Negative | 3400770 - 3401483 | 26872.5 |
| duf1330 domain-containing protein | HY78_RS16360 | Not Available | Positive | 3401590 - 3401895 | 11269.4 |
| 2fe-2s iron-sulfur cluster-binding protein | HY78_RS16365 | Not Available | Negative | 3401886 - 3402206 | 11129.2 |
| acyl-coa dehydrogenase family protein | HY78_RS16370 | Not Available | Negative | 3402250 - 3403413 | 42319.1 |
| amp-binding protein | HY78_RS16375 | Not Available | Positive | 3403644 - 3405329 | 59716.5 |
| enoyl-coa hydratase/isomerase family protein | HY78_RS16380 | Not Available | Positive | 3405326 - 3406120 | 28164.6 |
| fad-binding protein | HY78_RS16385 | Not Available | Negative | 3406117 - 3407811 | 60872.9 |
| acetyl-coa hydrolase/transferase family protein | HY78_RS16390 | Not Available | Negative | 3407808 - 3409091 | 44733.6 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS16395 | Not Available | Negative | 3409072 - 3409869 | 27629.0 |
| acyl-coa dehydrogenase family protein | HY78_RS16400 | Not Available | Negative | 3409866 - 3411032 | 43320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
