Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HY78_RS16155 | Not Available | Positive | 3356475 - 3357086 | 20739.6 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS16160 | Not Available | Negative | 3357146 - 3357610 | 17199.9 |
| cyclase family protein | HY78_RS16165 | Not Available | Positive | 3357697 - 3358500 | 28703.7 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | HY78_RS16170 | Not Available | Positive | 3358493 - 3360619 | 76302.7 |
| indolepyruvate oxidoreductase subunit beta family protein | HY78_RS16175 | Not Available | Positive | 3360619 - 3362100 | 53761.4 |
| phytoene desaturase family protein | HY78_RS16180 | Not Available | Negative | 3362170 - 3363741 | 55480.3 |
| sdr family oxidoreductase | HY78_RS16185 | Not Available | Negative | 3363738 - 3364529 | 26444.8 |
| cysteine hydrolase family protein | HY78_RS16190 | Not Available | Negative | 3364526 - 3365110 | 20059.9 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | HY78_RS16195 | Not Available | Negative | 3365107 - 3365595 | 18936.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS16200 | Not Available | Negative | 3365592 - 3366902 | 48574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
