Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | HY78_RS15955 | Not Available | Negative | 3312072 - 3313202 | 38782.7 |
| l-aspartate oxidase | HY78_RS15960 | Not Available | Negative | 3313298 - 3314893 | 58372.6 |
| abc transporter atp-binding protein | HY78_RS15965 | Not Available | Negative | 3314893 - 3315810 | 33147.8 |
| hypothetical protein | HY78_RS15970 | Not Available | Negative | 3315917 - 3316129 | 7855.71 |
| hypothetical protein | HY78_RS15975 | Not Available | Negative | 3316165 - 3316830 | 24204.9 |
| spor domain-containing protein | HY78_RS15980 | Not Available | Negative | 3317000 - 3317947 | 32676.7 |
| reverse transcriptase-like protein | HY78_RS15985 | Not Available | Negative | 3318043 - 3318417 | 13780.5 |
| hypothetical protein | HY78_RS15990 | Not Available | Positive | 3318453 - 3318773 | 10987.3 |
| zinc-finger domain-containing protein | HY78_RS15995 | Not Available | Positive | 3318838 - 3319044 | 7071.26 |
| metalloprotease tldd | HY78_RS16000 | Not Available | Positive | 3319261 - 3320691 | 50495.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
